Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912307.1_cds_XP_016462372.1_55609
CDS Infomation

[gene=LOC107785558] [db_xref=GeneID:107785558] [protein=protein UPSTREAM OF FLC-like] [protein_id=XP_016462372.1] [location=complement(join(88440..88632,90177..91052,91196..91265,91465..91699))] [gbkey=CDS]
Sequence

ATGGCGGTTTCGTCGAGATCAGTTAGAGCAACGGAGCTACTTCAAATGCCTAAGAAATGG
AAAGATAGAGAAACTAGCCCTGAACGTACCAAAGTTTGGACTGAAACTCCAAACCATAAG
CCCAAATCTGAACGTAAAGTCCCTGTTGTTTATTATCTCACTAGAAATGGCCAACTTGAA
CACCCCCATTTCATGGAAGTCCCTCTTTCTTCCCCTGATGGTCTTTATCTTAGAGATGTG
ATTAACCGCTTGAATTTTCTCCGAGGAAAAGGCATGGCTTCGCTGTATTCATGGTCAGCC
AAAAGAAGCTATAGAAATGGATTTGTGTGGCACGATTTGTCGGAGCACGATTTTATATTT
CCAGCACACGGTCAAGAGTATGTTCTCAAAGGCTCAGAACTTGTCGACGGTGCAATTACA
ATTACATCTCAATCGGAAGAAGTAGAATTCTCCAGTTCGAAAACTCCGCTGCCGGAAGTG
AGAAAAATCGCCGAAGATCGTGAATTCCCTGCGGTTTCACGGCGGCGGAATCAATCGTGG
TGTTCGGCTGATTTCCACGAGTACAGAGTGTATAAGGCAGAGTCTAGCGAGGATTCTACG
GGAAAAGCCGCCGCCGATGCGTCAACTCAAACCGACGACCGCCGTCGCCGGCGAAGAGAA
ATCGGAATCGTCGAAGAAGAAGAACAGGAGAGAAATTCTGGTCAAAGCCAGTCAACAGAG
CTGAGCCGAGGTGAAATTTCTCCACCGCCGTCGGATTCAAGCCCGGAAACTCTCGAAACG
TTGATGAAAGCCGACGGTAGAGTAATCGTACGGTCAGAAACAGTCAACGATGATCAAACG
GCTAACAATAATCAATCATCAAATGGAAAGGGCAGCAGCAGAGCATCTTCCGTGTTCATG
CACTTATTATCGTGTGGGTCAATGTCCTTCAAAGATTGTGGGCCCGGTTATTATGGGAAA
GATCATGGGCTTTCCTTGATTTCACACTACAAATCCAGACTGCCACGTGGAGCAGGGTTG
AATCAGGTGGAGAAGGATGCAGAGAATACTACGGTGGAGTATCAAGGAATCATAGAACGA
GTTAAGCTAGAGGATAAGGAGTACTTTAGTGGAAGCTTAATAGAGACAAAGAAGGACGAA
TATCCAGCTCTGAAGAGATCTTCTTCATTTAATGCAGATCGGAGCGCAAAGTTGGAACTG
AGGGAGAAAGAGATAGATGAAGTGAGAGCAAGATGCATTCCAAGAAGGCCAAAGAATCAA
TCCACCAAAAAGGAAGGAAGCAGTGACTTGTCTTGCAGTAGCAGTGCTAGTATTTCAAGT
AGTAGCAGTAGCCAACATGGTAGCAAAAGGGTAGTGGTTCAACCCCAAGTTTAG

Peptide Sequence

PEP ID

XP_016462372.1
PEP Infomation

PREDICTED: protein UPSTREAM OF FLC-like [Nicotiana tabacum]
Sequence

MAVSSRSVRATELLQMPKKWKDRETSPERTKVWTETPNHKPKSERKVPVVYYLTRNGQLE
HPHFMEVPLSSPDGLYLRDVINRLNFLRGKGMASLYSWSAKRSYRNGFVWHDLSEHDFIF
PAHGQEYVLKGSELVDGAITITSQSEEVEFSSSKTPLPEVRKIAEDREFPAVSRRRNQSW
CSADFHEYRVYKAESSEDSTGKAAADASTQTDDRRRRRREIGIVEEEEQERNSGQSQSTE
LSRGEISPPPSDSSPETLETLMKADGRVIVRSETVNDDQTANNNQSSNGKGSSRASSVFM
HLLSCGSMSFKDCGPGYYGKDHGLSLISHYKSRLPRGAGLNQVEKDAENTTVEYQGIIER
VKLEDKEYFSGSLIETKKDEYPALKRSSSFNADRSAKLELREKEIDEVRARCIPRRPKNQ
STKKEGSSDLSCSSSASISSSSSSQHGSKRVVVQPQV

Transcript Sequence

Gene sequence data has not been registered.